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ISBRA
2009
Springer
16 years 1 months ago
Mean Square Residue Biclustering with Missing Data and Row Inversions
Cheng and Church proposed a greedy deletion-addition algorithm to find a given number of k biclusters, whose mean squared residues (MSRs) are below certain thresholds and the miss...
Stefan Gremalschi, Gulsah Altun, Irina Astrovskaya...
ISBRA
2009
Springer
16 years 1 months ago
Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing
KIM, JIHYE. Mining of Cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing. (Under the direction of Steffen Heber). Alternative splicing (AS) is an important...
Jihye Kim, Sihui Zhao, Brian E. Howard, Steffen He...
ISBRA
2009
Springer
16 years 1 months ago
Imputation-Based Local Ancestry Inference in Admixed Populations
Abstract. Accurate inference of local ancestry from whole-genome genetic variation data is critical for understanding the history of admixed human populations and detecting SNPs as...
Bogdan Pasaniuc, Justin Kennedy, Ion I. Mandoiu
ISBRA
2009
Springer
16 years 1 months ago
Untangling Tanglegrams: Comparing Trees by Their Drawings
A tanglegram is a pair of trees on the same set of leaves with matching leaves in the two trees joined by an edge. Tanglegrams are widely used in biology – to compare evolutiona...
Balaji Venkatachalam, Jim Apple, Katherine St. Joh...
PRIB
2009
Springer
120views Bioinformatics» more  PRIB 2009»
16 years 1 months ago
Knowledge-Guided Docking of WW Domain Proteins and Flexible Ligands
Studies of interactions between protein domains and ligands are important in many aspects such as cellular signaling. We present a knowledge-guided approach for docking protein dom...
Haiyun Lu, Hao Li, Shamima Banu Bte Sm Rashid, Wee...