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CCE
2008
15 years 6 months ago
Informative gene selection and design of regulatory networks using integer optimization
A central problem in bioinformatics and systems biology is the selection of appropriate models in a rational and systematic way. This fundamentally combinatorial problem can be re...
Eric Yang, Timothy Maguire, Martin L. Yarmush, Ioa...
IJBRA
2006
107views more  IJBRA 2006»
15 years 6 months ago
Probabilistic models for biological sequences: selection and Maximum Likelihood estimation
: Probabilistic models for biological sequences (DNA and proteins) are frequently used in bioinformatics. We describe statistical tests designed to detect the order of dependency a...
Svetlana Ekisheva, Mark Borodovsky
ITSSA
2006
207views more  ITSSA 2006»
15 years 6 months ago
An Agent System for Automatic Workflows Composition in Grid Environments
: General purpose workflow management systems are often unable to match user requirements of a particular application. In many points of the workflow the user has to take decisions...
Alessandro Orro, Luciano Milanesi
JAIR
2006
138views more  JAIR 2006»
15 years 6 months ago
Logical Hidden Markov Models
Logical hidden Markov models (LOHMMs) upgrade traditional hidden Markov models to deal with sequences of structured symbols in the form of logical atoms, rather than flat characte...
Kristian Kersting, Luc De Raedt, Tapani Raiko
NAR
2006
61views more  NAR 2006»
15 years 6 months ago
E-MSD: improving data deposition and structure quality
The Macromolecular Structure Database (MSD) (http://www.ebi.ac.uk/msd/) [H. Boutselakis, D. Dimitropoulos, J. Fillon, A. Golovin, K. Henrick, A. Hussain, J. Ionides, M. John, P. A...
Mohammed Tagari, John G. Tate, G. J. Swaminathan, ...