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WABI
2001
Springer
15 years 11 months ago
A Chemical-Distance-Based Test for Positive Darwinian Selection
There are very few instances in which positive Darwinian selection has been convincingly demonstrated at the molecular level. In this study, we present a novel test for detecting p...
Tal Pupko, Roded Sharan, Masami Hasegawa, Ron Sham...
BIBE
2009
IEEE
102views Bioinformatics» more  BIBE 2009»
15 years 10 months ago
Online Discovery and Refinement of Novel Genes Using GeneScope
We present a novel gene finding and validation tool, called GeneScope, which is capable of finding and validating genes declaratively by autonomously integrating heterogeneous onl...
Hasan M. Jamil, J. Jesmin
BIBE
2007
IEEE
149views Bioinformatics» more  BIBE 2007»
15 years 10 months ago
XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes
Multi-state molecules and multi-component complexes are commonly involved in cellular signaling. Accounting for molecules that have multiple potential states, such as a protein tha...
Michael L. Blinov, Ion I. Moraru
BIBE
2007
IEEE
208views Bioinformatics» more  BIBE 2007»
15 years 10 months ago
The GPU on biomedical image processing for color and phenotype analysis
The computational power and memory bandwidth of graphics processing units (GPUs) have turned them into attractive platforms for general-purpose applications. In this paper, we expl...
Antonio Ruiz, Manuel Ujaldon, Jose Antonio Andrade...
BIBE
2007
IEEE
159views Bioinformatics» more  BIBE 2007»
15 years 10 months ago
Non-negative Tensor Factorization Based on Alternating Large-scale Non-negativity-constrained Least Squares
Non-negative matrix factorization (NMF) and non-negative tensor factorization (NTF) have attracted much attention and have been successfully applied to numerous data analysis probl...
Hyunsoo Kim, Haesun Park, Lars Eldén