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CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
16 years 7 days ago
ssahaSNP A Polymorphism Detection Tool on a Whole Genome Scale
We present a software package which can detect homozygous SNPs and indels on a eukaryotic genome scale from millions of shotgun reads. Matching seeds of a few kmer words are found...
Zemin Ning, Mario Cáccamo, James C. Mulliki...
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
16 years 7 days ago
Discover True Association Rates in Multi-protein Complex Proteomics Data Sets
Experimental processes to collect and process proteomics data are increasingly complex, while the computational methods to assess the quality and significance of these data remain...
Changyu Shen, Lang Li, Jake Yue Chen
CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
16 years 7 days ago
Creating a Protein Ontology Resource
Protein Data Integration approaches at the moment considers data sources as data repositories, but not as applications; which in turn may embody complex interactions with other da...
Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Cha...
CSB
2005
IEEE
131views Bioinformatics» more  CSB 2005»
16 years 7 days ago
Current Challenges in Bioimage Database Design
Information technology research has played a significant role in the high-throughput acquisition and analysis of biological information. The tremendous amount of information gath...
Ambuj K. Singh, Arnab Bhattacharya, Vebjorn Ljosa
CSB
2005
IEEE
110views Bioinformatics» more  CSB 2005»
16 years 7 days ago
A Topological Measurement for Weighted Protein Interaction Network
High-throughput methods for detecting protein-protein interactions (PPI) have given researchers an initial global picture of protein interactions on a genomic scale. The usefulnes...
Pengjun Pei, Aidong Zhang