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BIBM
2008
IEEE
172views Bioinformatics» more  BIBM 2008»
16 years 1 months ago
Boosting Methods for Protein Fold Recognition: An Empirical Comparison
Protein fold recognition is the prediction of protein’s tertiary structure (Fold) given the protein’s sequence without relying on sequence similarity. Using machine learning t...
Yazhene Krishnaraj, Chandan K. Reddy
BIBM
2008
IEEE
113views Bioinformatics» more  BIBM 2008»
16 years 1 months ago
Towards Site-Based Protein Functional Annotations
Abstract—The exact relationship between protein active centers and protein functions is unclear even after decades of intensive study. To improve the functional prediction abilit...
Seak Fei Lei, Jun Huan
BIBM
2008
IEEE
110views Bioinformatics» more  BIBM 2008»
16 years 1 months ago
Genome Alignments Using MPI-LAGAN
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
Ruinan Zhang, Huzefa Rangwala, George Karypis
BIOTECHNO
2008
IEEE
16 years 1 months ago
Combining Boundaries and Ratings from Multiple Observers for Predicting Lung Nodule Characteristics
We use the data collected by the Lung Image Database Consortium (LIDC) for modeling the radiologists’ nodule interpretations based on image content of the nodule by using decisi...
Ekarin Varutbangkul, Vesna Mitrovic, Daniela Stan ...
ICTAI
2008
IEEE
16 years 1 months ago
Haplotype Inference with Boolean Constraint Solving: An Overview
Boolean satisfiability (SAT) finds a wide range of practical applications, including Artificial Intelligence and, more recently, Bioinformatics. Although encoding some combinat...
Inês Lynce, Ana Graça, João Ma...