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BIBE
2008
IEEE
115views Bioinformatics» more  BIBE 2008»
16 years 1 months ago
The Mouse Resource Browser (MRB) - A near-complete registry of mouse resources
—The Mouse Resource Browser MRB (http://bioit.fleming.gr/mrb) is an easy-to-use database for searching and retrieving mouse resource information. Currently, MRB hosts a list of 2...
Michael Zouberakis, C. Chandras, John M. Hancock, ...
BIBE
2008
IEEE
16 years 1 months ago
VIP: Visualization of integrated proteomics data
—The post-genomic era is characterized by the rapid data accumulation leading to unwieldy and large volumes of biological data. The proteomics results (large sets of identified p...
Eugenia G. Giannopoulou, Giorgos Lepouras, Elias S...
BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
16 years 1 months ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uniï...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara
BIBM
2008
IEEE
137views Bioinformatics» more  BIBM 2008»
16 years 1 months ago
Exploring Alternative Splicing Features Using Support Vector Machines
Alternative splicing is a mechanism for generating different gene transcripts (called isoforms) from the same genomic sequence. Finding alternative splicing events experimentally ...
Jing Xia, Doina Caragea, Susan Brown
BIBM
2008
IEEE
170views Bioinformatics» more  BIBM 2008»
16 years 1 months ago
Protein Sequence Motif Super-Rule-Tree (SRT) Structure Constructed by Hybrid Hierarchical K-Means Clustering Algorithm
— Protein sequence motifs information is crucial to the analysis of biologically significant regions. The conserved regions have the potential to determine the role of the protei...
Bernard Chen, Jieyue He, Stephen Pellicer, Yi Pan