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» Bioinformatics and biological reality
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IDA
2009
Springer
15 years 4 months ago
Estimating Hidden Influences in Metabolic and Gene Regulatory Networks
We address the applicability of blind source separation (BSS) methods for the estimation of hidden influences in biological dynamic systems such as metabolic or gene regulatory net...
Florian Blöchl, Fabian J. Theis
BMCBI
2010
201views more  BMCBI 2010»
15 years 3 months ago
IntelliGO: a new vector-based semantic similarity measure including annotation origin
Background: The Gene Ontology (GO) is a well known controlled vocabulary describing the biological process, molecular function and cellular component aspects of gene annotation. I...
Sidahmed Benabderrahmane, Malika Smaïl-Tabbon...
KDD
2005
ACM
139views Data Mining» more  KDD 2005»
16 years 6 months ago
Reasoning about sets using redescription mining
Redescription mining is a newly introduced data mining problem that seeks to find subsets of data that afford multiple definitions. It can be viewed as a generalization of associa...
Mohammed Javeed Zaki, Naren Ramakrishnan
KDD
2003
ACM
142views Data Mining» more  KDD 2003»
16 years 6 months ago
Extracting information from text and images for location proteomics
There is extensive interest in automating the collection, organization and summarization of biological data. Data in the form of figures and accompanying captions in literature pr...
Zhenzhen Kou, William W. Cohen, Robert F. Murphy
APSCC
2009
IEEE
16 years 1 months ago
SADI Semantic Web Services -- 'cause you can't always GET what you want!
SADI – Semantic Automated Discovery and Integration – is a set of standards-compliant Semantic Web Service design patterns that exploit the relatively straightforward interfac...
Mark D. Wilkinson, Benjamin P. Vandervalk, E. Luke...