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DNA
2005
Springer
15 years 12 months ago
Two Proteins for the Price of One: The Design of Maximally Compressed Coding Sequences
Abstract. The emerging field of synthetic biology moves beyond conventional genetic manipulation to construct novel life forms which do not originate in nature. We explore the pro...
Bei Wang, Dimitris Papamichail, Steffen Mueller, S...
ISMDA
2005
Springer
15 years 12 months ago
Extracting Molecular Diversity Between Populations Through Sequence Alignments
The use of sequence alignments for establishing protein homology relationships has an extensive tradition in the field of bioinformatics, and there is an increasing desire for more...
Steinar Thorvaldsen, Tor Flå, Nils Willassen
PPDP
2005
Springer
15 years 12 months ago
Heuristics, optimizations, and parallelism for protein structure prediction in CLP(FD)
The paper describes a constraint-based solution to the protein folding problem on face-centered cubic lattices—a biologically meaningful approximation of the general protein fol...
Alessandro Dal Palù, Agostino Dovier, Enric...
DNA
2004
Springer
165views Bioinformatics» more  DNA 2004»
15 years 11 months ago
Computing by Observing Bio-systems: The Case of Sticker Systems
Abstract. A very common approach in chemistry and biology is to observe the progress of an experiment, and take the result of this observation as the final output. Inspired by thi...
Artiom Alhazov, Matteo Cavaliere
SAG
2004
Springer
15 years 11 months ago
Modelling a Protein Structure Comparison Application on the Grid Using PROTEUS
Bioinformatics applications manage complex biological data stored into distributed and often heterogeneous databases and require large computing power. Among these, protein structu...
Mario Cannataro, Matteo Comin, Carlo Ferrari, Conc...