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BIBE
2004
IEEE
107views Bioinformatics» more  BIBE 2004»
15 years 10 months ago
Enhanced pClustering and Its Applications to Gene Expression Data
Clustering has been one of the most popular methods to discover useful biological insights from DNA microarray. An interesting paradigm is simultaneous clustering of both genes an...
Sungroh Yoon, Christine Nardini, Luca Benini, Giov...
CSB
2004
IEEE
142views Bioinformatics» more  CSB 2004»
15 years 10 months ago
FastR: Fast Database Search Tool for Non-Coding RNA
The discovery of novel non-coding RNAs has been among the most exciting recent developments in Biology. Yet, many more remain undiscovered. It has been hypothesized that there is ...
Vineet Bafna, Shaojie Zhang
CSB
2004
IEEE
109views Bioinformatics» more  CSB 2004»
15 years 10 months ago
Rec-I-DCM3: A Fast Algorithmic Technique for Reconstructing Large Phylogenetic Trees
Phylogenetic trees are commonly reconstructed based on hard optimization problems such as maximum parsimony (MP) and maximum likelihood (ML). Conventional MP heuristics for produc...
Usman Roshan, Bernard M. E. Moret, Tandy Warnow, T...
BIBE
2001
IEEE
193views Bioinformatics» more  BIBE 2001»
15 years 10 months ago
GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
Effective analysis of genome sequences and associated functional data requires access to many different kinds of biological information. For example, when analysing gene expressio...
Mike Cornell, Norman W. Paton, Shengli Wu, Carole ...
BIRD
2008
Springer
15 years 8 months ago
Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics
The thermodynamics of RNA-RNA interaction consists of two components: the energy necessary to make a potential binding region accessible, i.e., unpaired, and the energy gained from...
Ulrike Mückstein, Hakim Tafer, Stephan H. F. ...