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WOB
2004
103views Bioinformatics» more  WOB 2004»
15 years 7 months ago
An I/O Device Driver for Bioinformatics Tools: the case for BLAST
There are many bioinformatics tools that deal with input/ output (I/O) issues by using filing systems from the most common operating systems, such as Linux or MS Windows. However, ...
Renato Mauro, Sérgio Lifschitz
BIOINFORMATICS
2007
83views more  BIOINFORMATICS 2007»
15 years 6 months ago
Exploring biological network structure using exponential random graph models
Motivation: The functioning of biological networks depends in large part on their complex underlying structure. When studying their systemic nature many modeling approaches focus ...
Zachary M. Saul, Vladimir Filkov
ISBRA
2009
Springer
16 years 28 days ago
Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks
Identifying gene regulatory networks from high-throughput gene expression data is one of the most important goals of bioinformatics, but it remains difficult to define what makes a...
Peter Larsen, Yang Dai
BIOINFORMATICS
2010
139views more  BIOINFORMATICS 2010»
15 years 6 months ago
adephylo: new tools for investigating the phylogenetic signal in biological traits
Summary: adephylo is a package for the R software dedicated to the analysis of comparative evolutionary data. Phylogenetic comparative methods initially aimed at accounting for or...
Thibaut Jombart, François Balloux, St&eacut...
CIA
2000
Springer
15 years 10 months ago
Applying Agents to Bioinformatics in GeneWeaver
Recent years have seen dramatic and sustained growth in the amount of genomic data being generated, including in late 1999 the first complete sequence of a human chromosome. The c...
Kevin Bryson, Michael Luck, Mike Joy, David T. Jon...