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» Bioinformatics and biological reality
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MAGS
2007
100views more  MAGS 2007»
15 years 5 months ago
Engineering agent-mediated integration of bioinformatics analysis tools
Abstract. The availability of massive amounts of biological data, distributed in various data sources, has prompted the development of a wide range of data analysis tools. However,...
Vassilis Koutkias, Andigoni Malousi, Nicos Maglave...
SIGMOD
2004
ACM
121views Database» more  SIGMOD 2004»
16 years 6 months ago
An Optimal Algorithm for Querying Tree Structures and its Applications in Bioinformatics
Trees and graphs are widely used to model biological databases. Providing efficient algorithms to support tree-based or graph-based querying is therefore an important issue. In th...
Hsiao-Fei Liu, Ya-Hui Chang, Kun-Mao Chao
BIBM
2007
IEEE
171views Bioinformatics» more  BIBM 2007»
16 years 11 days ago
GenMiner: Mining Informative Association Rules from Genomic Data
GENMINER is a smart adaptation of closed itemsets based association rules extraction to genomic data. It takes advantage of the novel NORDI discretization method and of the CLOSE ...
Ricardo Martínez, Claude Pasquier, Nicolas ...
ICFCA
2004
Springer
15 years 11 months ago
BLID: An Application of Logical Information Systems to Bioinformatics
BLID (Bio-Logical Intelligent Database) is a bioinformatic system designed to help biologists extract new knowledge from raw genome data by providing high-level facilities for both...
Sébastien Ferré, Ross D. King
ISMB
2000
15 years 7 months ago
An Evaluation of Ontology Exchange Languages for Bioinformatics
Ontologies are specifications of the concepts in a given field, and of the relationships among those concepts. The development of ontologies for molecular-biology information and ...
Robin McEntire, Peter D. Karp, Neil F. Abernethy, ...