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SAC
2009
ACM
16 years 1 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
SC
2009
ACM
16 years 1 months ago
Evaluating use of data flow systems for large graph analysis
Large graph analysis has become increasingly important and is widely used in many applications such as web mining, social network analysis, biology, and information retrieval. The...
Andy Yoo, Ian Kaplan
WWW
2009
ACM
16 years 1 months ago
Network-aware forward caching
This paper proposes and evaluates a Network Aware Forward Caching approach for determining the optimal deployment strategy of forward caches to a network. A key advantage of this ...
Jeffrey Erman, Alexandre Gerber, Mohammad Taghi Ha...
HIPEAC
2009
Springer
16 years 1 months ago
Adapting Application Mapping to Systematic Within-Die Process Variations on Chip Multiprocessors
Process variations, which lead to timing and power variations across identically-designed components, have been identified as one of the key future design challenges by the semico...
Yang Ding, Mahmut T. Kandemir, Mary Jane Irwin, Pa...
COMPSAC
2009
IEEE
16 years 1 months ago
Towards Validating Security Protocol Deployment in the Wild
As computing technology becomes increasingly pervasive and interconnected, mobility leads to shorter-lasting relationships between end-points with many different security requirem...
Luca Compagna, Ulrich Flegel, Volkmar Lotz