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Publication
273views
14 years 4 months ago
 Beyond Graphs: A New Synthesis.
Artificial neural networks, electronic circuits, and gene networks are some examples of systems that can be modeled as networks, that is, as collections of interconnected nodes. I...
Mattiussi, Claudio, Dürr, Peter, Marbach, Daniel ...
SAC
2009
ACM
16 years 1 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
BMCBI
2007
145views more  BMCBI 2007»
15 years 6 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
BMCBI
2005
116views more  BMCBI 2005»
15 years 6 months ago
Dynamic covariation between gene expression and proteome characteristics
Background: Cells react to changing intra- and extracellular signals by dynamically modulating complex biochemical networks. Cellular responses to extracellular signals lead to ch...
Mansour Taghavi Azar Sharabiani, Markku Siermala, ...
GECCO
2007
Springer
153views Optimization» more  GECCO 2007»
16 years 14 days ago
Analyzing the effects of module encapsulation on search space bias
Modularity is thought to improve the evolvability of biological systems [18, 22]. Recent studies in the field of evolutionary computation show that the use of modularity improves...
Ozlem O. Garibay, Annie S. Wu