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NAR
2006
59views more  NAR 2006»
15 years 6 months ago
GenDecoder: genetic code prediction for metazoan mitochondria
Although the majority of the organisms use the same genetic code to translate DNA, several variants have been described in a wide range of organisms, both in nuclear and organella...
Federico Abascal, Rafael Zardoya, David Posada
NAR
2006
128views more  NAR 2006»
15 years 6 months ago
Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee
Expresso is a multiple sequence alignment server that aligns sequences using structural information. The user only needs to provide sequences. The server runs BLAST to identify cl...
Fabrice Armougom, Sébastien Moretti, Olivie...
NAR
2006
86views more  NAR 2006»
15 years 6 months ago
ISfinder: the reference centre for bacterial insertion sequences
ISfinder (www-is.biotoul.fr) is a dedicated database for bacterial insertion sequences (ISs). It has superseded the Stanford reference center. One of its functions is to assign IS...
P. Siguier, J. Perochon, L. Lestrade, J. Mahillon,...
NAR
2006
71views more  NAR 2006»
15 years 6 months ago
TSEMA: interactive prediction of protein pairings between interacting families
An entire family of methodologies for predicting protein interactions is based on the observed fact that families of interacting proteins tend to have similar phylogenetic trees d...
José M. G. Izarzugaza, David de Juan, Carle...
NAR
2006
74views more  NAR 2006»
15 years 6 months ago
FlyRNAi: the Drosophila RNAi screening center database
RNA interference (RNAi) has become a powerful tool for genetic screening in Drosophila. At the Drosophila RNAi Screening Center (DRSC), we are using a library of over 21 000 doubl...
Ian Flockhart, Matthew Booker, Amy Kiger, Michael ...