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BMCBI
2010
152views more  BMCBI 2010»
15 years 6 months ago
FITBAR: a web tool for the robust prediction of prokaryotic regulons
Background: The binding of regulatory proteins to their specific DNA targets determines the accurate expression of the neighboring genes. The in silico prediction of new binding s...
Jacques Oberto
181
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BMCBI
2007
233views more  BMCBI 2007»
15 years 6 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
BMCBI
2007
119views more  BMCBI 2007»
15 years 6 months ago
Conceptual-level workflow modeling of scientific experiments using NMR as a case study
Background: Scientific workflows improve the process of scientific experiments by making computations explicit, underscoring data flow, and emphasizing the participation of humans...
Kacy K. Verdi, Heidi J. C. Ellis, Michael R. Gryk
CN
2008
100views more  CN 2008»
15 years 6 months ago
Building resilient low-diameter peer-to-peer topologies
As more applications rely on underlying peer-to-peer topologies, the need for efficient and resilient infrastructure has become more pressing. A number of important classes of top...
Rita H. Wouhaybi, Andrew T. Campbell
COMCOM
2008
153views more  COMCOM 2008»
15 years 6 months ago
Available bandwidth estimation and admission control for QoS routing in wireless mesh networks
This article presents an integrated admission control and routing mechanism for multi-rate wireless mesh networks. Admission control depends on precise estimates of available band...
Mesut Ali Ergin, Marco Gruteser, Lin Luo, Dipankar...
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