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» Approximate Global Alignment of Sequences
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AINA
2008
IEEE
16 years 9 days ago
Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences
The common-use gap penalty strategies, constant penalty and affine gap penalty, have been adopted in the traditional three-sequence alignment algorithm which considers the inserti...
Che-Lun Hung, Chun-Yuan Lin, Yeh-Ching Chung, Chua...
114
Voted
ICS
2010
Tsinghua U.
16 years 3 months ago
Global Alignment of Molecular Sequences via Ancestral State Reconstruction
Alexandr Andoni, Constantinos Daskalakis, Avinatan...
128
Voted
BIOINFORMATICS
2010
91views more  BIOINFORMATICS 2010»
15 years 6 months ago
GASSST: global alignment short sequence search tool
Guillaume Rizk, Dominique Lavenier
BIOINFORMATICS
2000
85views more  BIOINFORMATICS 2000»
15 years 5 months ago
VISTA : visualizing global DNA sequence alignments of arbitrary length
Chris Mayor, Michael Brudno, Jody R. Schwartz, Ale...
165
Voted
PAMI
2011
15 years 23 days ago
Approximately Global Optimization for Robust Alignment of Generalized Shapes
—In this paper, we introduce a novel method to solve shape alignment problems. We use gray-scale “images” to represent source shapes, and propose a novel two-component Gaussi...
Hongsheng Li, Tian Shen, Xiaolei Huang