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» Approximate Data Structures with Applications
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SAC
2006
ACM
16 years 18 days ago
Mining and analyzing the topological structure of protein-protein interaction networks
We report a comprehensive evaluation of the topological structure of protein-protein interaction (PPI) networks by mining and analyzing graphs constructed from the publicly availa...
Daniel Duanqing Wu, Xiaohua Hu
POPL
2006
ACM
16 years 7 months ago
The essence of command injection attacks in web applications
Web applications typically interact with a back-end database to retrieve persistent data and then present the data to the user as dynamically generated output, such as HTML web pa...
Zhendong Su, Gary Wassermann
WWW
2006
ACM
16 years 7 months ago
Knowledge modeling and its application in life sciences: a tale of two ontologies
High throughput glycoproteomics, similar to genomics and proteomics, involves extremely large volumes of distributed, heterogeneous data as a basis for identification and quantifi...
Satya Sanket Sahoo, Christopher Thomas, Amit P. Sh...
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BMCBI
2006
119views more  BMCBI 2006»
15 years 6 months ago
Hidden Markov Model Variants and their Application
Markov statistical methods may make it possible to develop an unsupervised learning process that can automatically identify genomic structure in prokaryotes in a comprehensive way...
Stephen Winters-Hilt
BMCBI
2007
115views more  BMCBI 2007»
15 years 6 months ago
A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector
Background: Hidden Markov Models (HMMs) provide an excellent means for structure identification and feature extraction on stochastic sequential data. An HMM-with-Duration (HMMwD) ...
Stephen Winters-Hilt, Carl Baribault