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BMCBI
2006
128views more  BMCBI 2006»
15 years 6 months ago
Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it
Background: The proliferation of data repositories in bioinformatics has resulted in the development of numerous interfaces that allow scientists to browse, search and analyse the...
Kevin L. Garwood, Christopher Garwood, Cornelia He...
183
Voted
BMCBI
2004
196views more  BMCBI 2004»
15 years 6 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
EMSOFT
2010
Springer
15 years 4 months ago
Initiating a design pattern catalog for embedded network systems
In the domain of desktop software, design patterns have had a profound impact; they are applied ubiquitously across a broad range of applications. Patterns serve both to promulgat...
Sally K. Wahba, Jason O. Hallstrom, Neelam Soundar...
BMCBI
2011
14 years 10 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
196
Voted
IPPS
2010
IEEE
15 years 4 months ago
Oversubscription on multicore processors
Abstract: Existing multicore systems already provide deep levels of thread parallelism. Hybrid programming models and composability of parallel libraries are very active areas of r...
Costin Iancu, Steven Hofmeyr, Filip Blagojevic, Yi...