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TCBB
2008
113views more  TCBB 2008»
15 years 6 months ago
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays
The representation of a genome by oligonucleotide probes is a prerequisite for the analysis of many of its basic properties, such as transcription factor binding sites, chromosomal...
Alexander Schliep, Roland Krause
233
Voted
JMLR
2012
13 years 9 months ago
A General Framework for Structured Sparsity via Proximal Optimization
We study a generalized framework for structured sparsity. It extends the well known methods of Lasso and Group Lasso by incorporating additional constraints on the variables as pa...
Luca Baldassarre, Jean Morales, Andreas Argyriou, ...
ICDE
2012
IEEE
252views Database» more  ICDE 2012»
13 years 9 months ago
Approximate String Membership Checking: A Multiple Filter, Optimization-Based Approach
— We consider the approximate string membership checking (ASMC) problem of extracting all the strings or substrings in a document that approximately match some string in a given ...
Chong Sun, Jeffrey F. Naughton, Siddharth Barman
SIGMOD
2006
ACM
137views Database» more  SIGMOD 2006»
16 years 7 months ago
Optimal multi-scale patterns in time series streams
We introduce a method to discover optimal local patterns, which concisely describe the main trends in a time series. Our approach examines the time series at multiple time scales ...
Spiros Papadimitriou, Philip S. Yu
ICCAD
2007
IEEE
116views Hardware» more  ICCAD 2007»
16 years 3 months ago
Device and architecture concurrent optimization for FPGA transient soft error rate
Late CMOS scaling reduces device reliability, and existing work has studied the permanent SER (soft error rate) for configuration memory in FPGA extensively. In this paper, we sh...
Yan Lin, Lei He