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BMCBI
2011
15 years 1 months ago
RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome contigs assembled from DNA reads of environmental samples. Because of the diver...
Ozkan U. Nalbantoglu, Samuel F. Way, Steven H. Hin...
COLING
2010
15 years 1 months ago
Recognizing Medication related Entities in Hospital Discharge Summaries using Support Vector Machine
Due to the lack of annotated data sets, there are few studies on machine learning based approaches to extract named entities (NEs) in clinical text. The 2009 i2b2 NLP challenge is...
Son Doan, Hua Xu
NAR
2011
357views Computer Vision» more  NAR 2011»
15 years 1 months ago
miRGator v2.0 : an integrated system for functional investigation of microRNAs
miRGator is an integrated database of microRNA (miRNA)-associated gene expression, target prediction, disease association and genomic annotation, which aims to facilitate function...
Sooyoung Cho, Yukyung Jun, Sanghyun Lee, Hyung-Seo...
NAR
2011
257views Computer Vision» more  NAR 2011»
14 years 9 months ago
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
An essential prerequisite for any systems-level understanding of cellular functions is to correctly uncover and annotate all functional interactions among proteins in the cell. To...
Damian Szklarczyk, Andrea Franceschini, Michael Ku...
PAMI
2012
13 years 9 months ago
Exploring Context and Content Links in Social Media: A Latent Space Method
—Social media networks contain both content and context-specific information. Most existing methods work with either of the two for the purpose of multimedia mining and retrieva...
Guo-Jun Qi, Charu C. Aggarwal, Qi Tian, Heng Ji, T...