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VLDB
2004
ACM
118views Database» more  VLDB 2004»
16 years 19 hour ago
On the performance of bitmap indices for high cardinality attributes
It is well established that bitmap indices are efficient for read-only attributes with low attribute cardinalities. For an attribute with a high cardinality, the size of the bitma...
Kesheng Wu, Ekow J. Otoo, Arie Shoshani
BMCBI
2010
165views more  BMCBI 2010»
15 years 6 months ago
Bayesian integrated modeling of expression data: a case study on RhoG
Background: DNA microarrays provide an efficient method for measuring activity of genes in parallel and even covering all the known transcripts of an organism on a single array. T...
Rashi Gupta, Dario Greco, Petri Auvinen, Elja Arja...
BMCBI
2010
135views more  BMCBI 2010»
15 years 6 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
BMCBI
2008
125views more  BMCBI 2008»
15 years 6 months ago
XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
Background: Advances in automated DNA sequencing technology have accelerated the generation of metagenomic DNA sequences, especially environmental ribosomal RNA gene (rDNA) sequen...
Daniel N. Frank
BMCBI
2007
118views more  BMCBI 2007»
15 years 6 months ago
A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of
Background: Most human genes produce several transcripts with different exon contents by using alternative promoters, alternative polyadenylation sites and alternative splice site...
Pierre de la Grange, Martin Dutertre, Margot Corre...