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» Analysis of Variance for Gene Expression Microarray Data
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CMSB
2004
Springer
15 years 10 months ago
Residual Bootstrapping and Median Filtering for Robust Estimation of Gene Networks from Microarray Data
We propose a robust estimation method of gene networks based on microarray gene expression data. It is well-known that microarray data contain a large amount of noise and some outl...
Seiya Imoto, Tomoyuki Higuchi, SunYong Kim, Euna J...
BMCBI
2007
180views more  BMCBI 2007»
15 years 6 months ago
Using expression arrays for copy number detection: an example from E. coli
Background: The sequencing of many genomes and tiling arrays consisting of millions of DNA segments spanning entire genomes have made high-resolution copy number analysis possible...
Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitz...
BMCBI
2008
126views more  BMCBI 2008»
15 years 6 months ago
GeneChaser: Identifying all biological and clinical conditions in which genes of interest are differentially expressed
Background: The amount of gene expression data in the public repositories, such as NCBI Gene Expression Omnibus (GEO) has grown exponentially, and provides a gold mine for bioinfo...
Rong Chen, Rohan Mallelwar, Ajit Thosar, Shivkumar...
BMCBI
2006
203views more  BMCBI 2006»
15 years 6 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
ICMLA
2008
15 years 7 months ago
Microarray Classification from Several Two-Gene Expression Comparisons
We describe our contribution to the ICMLA2008 "Automated Micro-Array Classification Challenge". The design of our classifier is motivated by the special scenario encounte...
Donald Geman, Bahman Afsari, Aik Choon Tan, Daniel...