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» Analysis and Applications of the XDI model
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BMCBI
2006
100views more  BMCBI 2006»
15 years 6 months ago
Empirical array quality weights in the analysis of microarray data
Background: Assessment of array quality is an essential step in the analysis of data from microarray experiments. Once detected, less reliable arrays are typically excluded or &qu...
Matthew E. Ritchie, Dileepa S. Diyagama, Jody Neil...
BMCBI
2006
161views more  BMCBI 2006»
15 years 6 months ago
A method for rapid similarity analysis of RNA secondary structures
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
Na Liu, Tianming Wang
CASES
2009
ACM
16 years 1 months ago
Tight WCRT analysis of synchronous C programs
Accurate estimation of the tick length of a synchronous program is essential for efficient and predictable implementations that are devoid of timing faults. The techniques to dete...
Partha S. Roop, Sidharta Andalam, Reinhard von Han...
TACAS
1998
Springer
81views Algorithms» more  TACAS 1998»
15 years 11 months ago
Formal Design and Analysis of a Gear Controller
In this paper, we report on an application of the validation and veri cation tool kit Uppaal in the design and analysis of a prototype gear controller, carried out in a joint proje...
Magnus Lindahl, Paul Pettersson, Wang Yi
BMCBI
2010
154views more  BMCBI 2010»
15 years 6 months ago
Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
Background: A major goal of molecular biology is determining the mechanisms that control the transcription of genes. Motif Enrichment Analysis (MEA) seeks to determine which DNA-b...
Robert C. McLeay, Timothy L. Bailey