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» An integrative approach to modeling biological networks
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SAMOS
2010
Springer
15 years 4 months ago
Identifying communication models in Process Networks derived from Weakly Dynamic Programs
—Process Networks (PNs) is an appealing computation ion helping to specify an application in parallel form and realize it on parallel platforms. The key questions to be answered ...
Dmitry Nadezhkin, Todor Stefanov
BMCBI
2011
14 years 10 months ago
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks v
Background: Constraint-based approaches facilitate the prediction of cellular metabolic capabilities, based, in turn on predictions of the repertoire of enzymes encoded in the gen...
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwoz...
EVOW
2007
Springer
16 years 13 days ago
Modeling the Shoot Apical Meristem in A. thaliana : Parameter Estimation for Spatial Pattern Formation
Understanding the self-regulatory mechanisms controlling the spatial and temporal structure of multicellular organisms represents one of the major challenges in molecular biology. ...
Tim Hohm, Eckart Zitzler
CCS
2007
ACM
16 years 14 days ago
Topological analysis of network attack vulnerability
: To understand overall vulnerability to network attack, one must consider attacker exploits not just in isolation, but also in combination. That is, one must analyze how low-level...
Sushil Jajodia
ESANN
2007
15 years 7 months ago
Adaptive Global Metamodeling with Neural Networks
Due to the scale and computational complexity of current simulation codes, metamodels (or surrogate models) have become indispensable tools for exploring and understanding the desi...
Dirk Gorissen, Wouter Hendrickx, Tom Dhaene