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» An integrative approach to modeling biological networks
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BIBM
2008
IEEE
107views Bioinformatics» more  BIBM 2008»
16 years 23 days ago
A Functional Network of Yeast Genes Using Gene Ontology Information
In the post-genomic era, the organization of genes into networks has played an important role in characterizing the functions of individual genes and the interplay between them. I...
Erliang Zeng, Giri Narasimhan, Lisa Schneper, Kala...
CIBCB
2007
IEEE
15 years 10 months ago
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Ji He, Xinbin Dai, Xuechun Zhao
COLCOM
2005
IEEE
15 years 12 months ago
Symbiotic multi-path routing with attractor selection
In this paper we discuss the effects of symbiosis when using an attractor selection model for multi-path routing in an overlay network. Attractor selection is a biologically inspi...
Kenji Leibnitz, Naoki Wakamiya, Masayuki Murata
BMCBI
2007
158views more  BMCBI 2007»
15 years 6 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
GECCO
2009
Springer
16 years 25 days ago
Multiobjectivization for parameter estimation: a case-study on the segment polarity network of drosophila
Mathematical modeling for gene regulative networks (GRNs) provides an effective tool for hypothesis testing in biology. A necessary step in setting up such models is the estimati...
Tim Hohm, Eckart Zitzler