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» An experimental analysis of Lemke-Howson algorithm
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JCB
2002
160views more  JCB 2002»
15 years 6 months ago
Inference from Clustering with Application to Gene-Expression Microarrays
There are many algorithms to cluster sample data points based on nearness or a similarity measure. Often the implication is that points in different clusters come from different u...
Edward R. Dougherty, Junior Barrera, Marcel Brun, ...
BMCBI
2006
170views more  BMCBI 2006»
15 years 6 months ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...
CIKM
2009
Springer
16 years 1 months ago
Completing wikipedia's hyperlink structure through dimensionality reduction
Wikipedia is the largest monolithic repository of human knowledge. In addition to its sheer size, it represents a new encyclopedic paradigm by interconnecting articles through hyp...
Robert West, Doina Precup, Joelle Pineau
BMCBI
2010
150views more  BMCBI 2010»
15 years 6 months ago
Systematic calibration of a cell signaling network model
Background: Mathematical modeling is being applied to increasingly complex biological systems and datasets; however, the process of analyzing and calibrating against experimental ...
Kyoung Ae Kim, Sabrina L. Spencer, John G. Albeck,...
BMCBI
2008
124views more  BMCBI 2008»
15 years 6 months ago
Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease
Background: Comparative analysis of expression microarray studies is difficult due to the large influence of technical factors on experimental outcome. Still, the identified diffe...
Rob Jelier, Peter A. C. 't Hoen, Ellen Sterrenburg...