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» An Engineering Approach to Formal Methods
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ISSTA
2004
ACM
16 years 5 days ago
Model checking XML manipulating software
The use of XML as the de facto data exchange standard has allowed integration of heterogeneous web based software systems regardless of implementation platforms and programming la...
Xiang Fu, Tevfik Bultan, Jianwen Su
FASE
2001
Springer
15 years 11 months ago
A CSP View on UML-RT Structure Diagrams
Abstract. UML-RT is an extension of UML for modelling embedded reactive and real-time software systems. Its particular focus lies on system descriptions on the architectural level,...
Clemens Fischer, Ernst-Rüdiger Olderog, Heike...
APAQS
2001
IEEE
15 years 10 months ago
Incremental Fault-Tolerant Design in an Object-Oriented Setting
With the increasing emphasis on dependability in complex, distributed systems, it is essential that system development can be done gradually and at different levels of detail. In ...
Einar Broch Johnsen, Olaf Owe, Ellen Munthe-Kaas, ...
BIBE
2008
IEEE
142views Bioinformatics» more  BIBE 2008»
16 years 1 months ago
Optimizing performance, cost, and sensitivity in pairwise sequence search on a cluster of PlayStations
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
Ashwin M. Aji, Wu-chun Feng
BMCBI
2007
139views more  BMCBI 2007»
15 years 6 months ago
XSTREAM: A practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
Background: Biological sequence repeats arranged in tandem patterns are widespread in DNA and proteins. While many software tools have been designed to detect DNA tandem repeats (...
Aaron M. Newman, James B. Cooper