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» An Approach for Method Reengineering
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FOCS
1991
IEEE
15 years 10 months ago
A General Approach to Removing Degeneracies
We wish to increase the power of an arbitrary algorithm designed for non-degenerate input, by allowing it to execute on all inputs. We concentrate on in nitesimal symbolic perturba...
Ioannis Z. Emiris, John F. Canny
CPAIOR
2008
Springer
15 years 9 months ago
Connections in Networks: A Hybrid Approach
This paper extends our previous work by exploring the use of a hybrid solution method for solving the connection subgraph problem. We employ a two phase solution method, which dras...
Carla P. Gomes, Willem Jan van Hoeve, Ashish Sabha...
BMCBI
2010
144views more  BMCBI 2010»
15 years 7 months ago
Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model
Background: Large-scale genomic studies often identify large gene lists, for example, the genes sharing the same expression patterns. The interpretation of these gene lists is gen...
Xin He, Moushumi Sen Sarma, Xu Ling, Brant W. Chee...
BMCBI
2007
91views more  BMCBI 2007»
15 years 7 months ago
A machine learning approach for the identification of odorant binding proteins from sequence-derived properties
Background: Odorant binding proteins (OBPs) are believed to shuttle odorants from the environment to the underlying odorant receptors, for which they could potentially serve as od...
Ganesan Pugalenthi, E. Ke Tang, Ponnuthurai N. Sug...
BMCBI
2006
122views more  BMCBI 2006»
15 years 7 months ago
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks
Background:Receptors and scaffold proteins possess a number of distinct domains and bind multiple partners. A common problem in modeling signaling systems arises from a combinator...
Holger Conzelmann, Julio Saez-Rodriguez, Thomas Sa...