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» An Analysis of Permutations in Arrays
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COMBINATORICS
2004
81views more  COMBINATORICS 2004»
15 years 6 months ago
A Card Shuffling Analysis of Deformations of the Plancherel Measure of the Symmetric Group
This paper finds and analyzes a formula for the total variation distance between iterations of riffle shuffles and iterations of "cut and then riffle shuffle". This allo...
Jason E. Fulman
RECOMB
2008
Springer
16 years 6 months ago
Hurdles Hardly Have to Be Heeded
Abstract. As data about genomic architecture accumulates, genomic rearrangements have attracted increasing attention. One of the main rearrangement mechanisms, inversions (also cal...
Krister M. Swenson, Yu Lin, Vaibhav Rajan, Bernard...
APPT
2009
Springer
16 years 23 days ago
Performance Improvement of Multimedia Kernels by Alleviating Overhead Instructions on SIMD Devices
SIMD extension is one of the most common and effective technique to exploit data-level parallelism in today’s processor designs. However, the performance of SIMD architectures i...
Asadollah Shahbahrami, Ben H. H. Juurlink
CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
15 years 11 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann
BIOINFORMATICS
2006
96views more  BIOINFORMATICS 2006»
15 years 6 months ago
Joint estimation of calibration and expression for high-density oligonucleotide arrays
Motivation: The need for normalization in microarray experiments has been well documented in the literature. Currently, most analysis methods treat normalization and analysis as a...
Ann L. Oberg, Douglas W. Mahoney, Karla V. Ballman...