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BMCBI
2005
212views more  BMCBI 2005»
15 years 6 months ago
PAGE: Parametric Analysis of Gene Set Enrichment
Background: Gene set enrichment analysis (GSEA) is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes i...
Seon-Young Kim, David J. Volsky
BMCBI
2010
125views more  BMCBI 2010»
15 years 1 months ago
ProbFAST: Probabilistic Functional Analysis System Tool
Background: The post-genomic era has brought new challenges regarding the understanding of the organization and function of the human genome. Many of these challenges are centered...
Israel T. da Silva, Ricardo Z. N. Vêncio, Th...
FCA
2005
Springer
207views Formal Methods» more  FCA 2005»
15 years 12 months ago
From Formal Concept Analysis to Contextual Logic
Abstract. A main goal of Formal Concept Analysis from its very beginning has been the support of rational communication. The source of this goal lies in our understanding of mathem...
Frithjof Dau, Julia Klinger
BMCBI
2006
203views more  BMCBI 2006»
15 years 6 months ago
Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis dat
Background: A complete understanding of the regulatory mechanisms of gene expression is the next important issue of genomics. Many bioinformaticians have developed methods and alg...
Seon-Young Kim, YongSung Kim
ENTCS
2007
116views more  ENTCS 2007»
15 years 6 months ago
Experiments in Cost Analysis of Java Bytecode
Recently, we proposed a general framework for the cost analysis of Java bytecode which can be used for measuring resource usage. This analysis generates, at compile-time, cost rel...
Elvira Albert, Puri Arenas, Samir Genaim, Germ&aac...