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BMCBI
2008
166views more  BMCBI 2008»
15 years 5 months ago
QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR
Background: Medium- to large-scale expression profiling using quantitative polymerase chain reaction (qPCR) assays are becoming increasingly important in genomics research. A majo...
Samuel Arvidsson, Miroslaw Kwasniewski, Diego Maur...
PAMI
2010
205views more  PAMI 2010»
15 years 4 months ago
Learning a Hierarchical Deformable Template for Rapid Deformable Object Parsing
In this paper, we address the tasks of detecting, segmenting, parsing, and matching deformable objects. We use a novel probabilistic object model that we call a hierarchical defor...
Long Zhu, Yuanhao Chen, Alan L. Yuille
BMCBI
2010
123views more  BMCBI 2010»
15 years 1 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
BMCBI
2010
216views more  BMCBI 2010»
15 years 1 months ago
Bayesian Inference of the Number of Factors in Gene-Expression Analysis: Application to Human Virus Challenge Studies
Background: Nonparametric Bayesian techniques have been developed recently to extend the sophistication of factor models, allowing one to infer the number of appropriate factors f...
Bo Chen, Minhua Chen, John William Paisley, Aimee ...
TC
2011
15 years 26 days ago
Software-Based Cache Coherence with Hardware-Assisted Selective Self-Invalidations Using Bloom Filters
— Implementing shared memory consistency models on top of hardware caches gives rise to the well-known cache coherence problem. The standard solution involves implementing cohere...
Thomas J. Ashby, Pedro Diaz, Marcelo Cintra
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