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SCFBM
2008
92views more  SCFBM 2008»
15 years 5 months ago
CRANKITE: A fast polypeptide backbone conformation sampler
Background: CRANKITE is a suite of programs for simulating backbone conformations of polypeptides and proteins. The core of the suite is an efficient Metropolis Monte Carlo sample...
Alexei A. Podtelezhnikov, David L. Wild
JELIA
2010
Springer
15 years 4 months ago
Stable Belief Sets Revisited
Stable belief sets were introduced by R. Stalnaker in the early ’80s, as a formal representation of the epistemic state for an ideal introspective agent. This notion motivated M...
Costas D. Koutras, Yorgos Zikos
RECOMB
2010
Springer
15 years 4 months ago
Predicting Nucleosome Positioning Using Multiple Evidence Tracks
Abstract. We describe a probabilistic model, implemented as a dynamic Bayesian network, that can be used to predict nucleosome positioning along a chromosome based on one or more g...
Sheila M. Reynolds, Zhiping Weng, Jeff A. Bilmes, ...
SCN
2010
Springer
144views Communications» more  SCN 2010»
15 years 4 months ago
Generic Constructions of Parallel Key-Insulated Encryption
Exposure of a secret key is a significant threat in practice. As a notion of security against key exposure, Dodis et al. advocated key-insulated security, and proposed concrete k...
Goichiro Hanaoka, Jian Weng
IEEEPACT
2009
IEEE
15 years 4 months ago
Adaptive Locks: Combining Transactions and Locks for Efficient Concurrency
Transactional memory is being advanced as an alternative to traditional lock-based synchronization for concurrent programming. Transactional memory simplifies the programming mode...
Takayuki Usui, Reimer Behrends, Jacob Evans, Yanni...
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