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WOB
2004
103views Bioinformatics» more  WOB 2004»
15 years 8 months ago
An I/O Device Driver for Bioinformatics Tools: the case for BLAST
There are many bioinformatics tools that deal with input/ output (I/O) issues by using filing systems from the most common operating systems, such as Linux or MS Windows. However, ...
Renato Mauro, Sérgio Lifschitz
NAACL
2003
15 years 8 months ago
Statistical Phrase-Based Translation
We propose a new phrase-based translation model and decoding algorithm that enables us to evaluate and compare several, previously proposed phrase-based translation models. Within...
Philipp Koehn, Franz Josef Och, Daniel Marcu
NIPS
2003
15 years 8 months ago
Gene Expression Clustering with Functional Mixture Models
We propose a functional mixture model for simultaneous clustering and alignment of sets of curves measured on a discrete time grid. The model is specifically tailored to gene exp...
Darya Chudova, Christopher E. Hart, Eric Mjolsness...
PSB
2003
15 years 8 months ago
MAP: Searching Large Genome Databases
A number of biological applications require comparison of large genome strings. Current techniques suffer from both disk I/O and computational cost because of extensive memory req...
Tamer Kahveci, Ambuj K. Singh
UAI
2003
15 years 8 months ago
Probabilistic Models For Joint Clustering And Time-Warping Of Multidimensional Curves
In this paper we present a family of models and learning algorithms that can simultaneously align and cluster sets of multidimensional curves measured on a discrete time grid. Our...
Darya Chudova, Scott Gaffney, Padhraic Smyth