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BMCBI
2004
115views more  BMCBI 2004»
15 years 6 months ago
An SVD-based comparison of nine whole eukaryotic genomes supports a coelomate rather than ecdysozoan lineage
Background: Eukaryotic whole genome sequences are accumulating at an impressive rate. Effective methods for comparing multiple whole eukaryotic genomes on a large scale are needed...
Gary W. Stuart, Michael W. Berry
BMCBI
2006
159views more  BMCBI 2006»
15 years 6 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
EMNLP
2009
15 years 4 months ago
Parser Adaptation and Projection with Quasi-Synchronous Grammar Features
We connect two scenarios in structured learning: adapting a parser trained on one corpus to another annotation style, and projecting syntactic annotations from one language to ano...
David A. Smith, Jason Eisner
CGF
2006
191views more  CGF 2006»
15 years 6 months ago
A Robust Two-Step Procedure for Quad-Dominant Remeshing
We propose a new technique for quad-dominant remeshing which separates the local regularity requirements from the global alignment requirements by working in two steps. In the fir...
Martin Marinov, Leif Kobbelt
FPL
2010
Springer
188views Hardware» more  FPL 2010»
15 years 4 months ago
SeqHive: A Reconfigurable Computer Cluster for Genome Re-sequencing
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
Kristian Stevens, Henry Chen, Terry Filiba, Peter ...