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GECCO
2010
Springer
155views Optimization» more  GECCO 2010»
15 years 11 months ago
Negative selection algorithms without generating detectors
Negative selection algorithms are immune-inspired classifiers that are trained on negative examples only. Classification is performed by generating detectors that match none of ...
Maciej Liskiewicz, Johannes Textor
RECOMB
1997
Springer
15 years 10 months ago
A branch-and-cut algorithm for multiple sequence alignment
Multiple sequence alignment is an important problem in computational biology. We study the Maximum Trace formulation introduced by Kececioglu [?]. We first phrase the problem in ...
Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kur...
JCB
2006
115views more  JCB 2006»
15 years 6 months ago
Designing an A* Algorithm for Calculating Edit Distance between Rooted-Unordered Trees
Tree structures are useful for describing and analyzing biological objects and processes. Consequently, there is a need to design metrics and algorithms to compare trees. A natura...
Yair Horesh, Ramit Mehr, Ron Unger
SODA
2010
ACM
149views Algorithms» more  SODA 2010»
16 years 4 months ago
Sharp kernel clustering algorithms and their associated Grothendieck inequalities
abstract Subhash Khot Assaf Naor In the kernel clustering problem we are given a (large) n ? n symmetric positive semidefinite matrix A = (aij) with n i=1 n j=1 aij = 0 and a (sma...
Subhash Khot, Assaf Naor
SPAA
2003
ACM
15 years 11 months ago
A practical algorithm for constructing oblivious routing schemes
In a (randomized) oblivious routing scheme the path chosen for a request between a source s and a target t is independent from the current traffic in the network. Hence, such a sc...
Marcin Bienkowski, Miroslaw Korzeniowski, Harald R...