Sciweavers

1421 search results - page 94 / 285
» Algorithms for subsequence combinatorics
Sort
View
CPM
2005
Springer
97views Combinatorics» more  CPM 2005»
15 years 11 months ago
On the Complexity of Sparse Exon Assembly
Gene structure prediction is one of the most important problems in computational molecular biology. It involves two steps: the first is finding the evidence (e.g. predicting spl...
Carmel Kent, Gad M. Landau, Michal Ziv-Ukelson
CPM
2004
Springer
94views Combinatorics» more  CPM 2004»
15 years 11 months ago
Sorting by Length-Weighted Reversals: Dealing with Signs and Circularity
Abstract. We consider the problem of sorting linear and circular permutations and 0/1 sequences by reversals in a length-sensitive cost model. We extend the results on sorting by l...
Firas Swidan, Michael A. Bender, Dongdong Ge, Sima...
COMPGEOM
2007
ACM
15 years 10 months ago
An optimal generalization of the centerpoint theorem, and its extensions
We prove an optimal generalization of the centerpoint theorem: given a set P of n points in the plane, there exist two points (not necessarily among input points) that hit all con...
Saurabh Ray, Nabil H. Mustafa
JCB
2008
144views more  JCB 2008»
15 years 6 months ago
Multi-Break Rearrangements and Breakpoint Re-Uses: From Circular to Linear Genomes
Multi-break rearrangements break a genome into multiple fragments and further glue them together in a new order. While 2-break rearrangements represent standard reversals, fusions...
Max A. Alekseyev
CCO
2001
Springer
161views Combinatorics» more  CCO 2001»
15 years 10 months ago
Branch, Cut, and Price: Sequential and Parallel
Branch, cut, and price (BCP) is an LP-based branch and bound technique for solving large-scale discrete optimization problems (DOPs). In BCP, both cuts and variables can be generat...
Laszlo Ladányi, Ted K. Ralphs, Leslie E. Tr...