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TSE
2008
91views more  TSE 2008»
15 years 6 months ago
Privately Finding Specifications
Buggy software is a reality and automated techniques for discovering bugs are highly desirable. A specification describes the correct behavior of a program. For example, a file mus...
Westley Weimer, Nina Mishra
BMCBI
2006
133views more  BMCBI 2006»
15 years 6 months ago
An integrated approach to the prediction of domain-domain interactions
Background: The development of high-throughput technologies has produced several large scale protein interaction data sets for multiple species, and significant efforts have been ...
Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen
BMCBI
2005
109views more  BMCBI 2005»
15 years 6 months ago
Automation of gene assignments to metabolic pathways using high-throughput expression data
Background: Accurate assignment of genes to pathways is essential in order to understand the functional role of genes and to map the existing pathways in a given genome. Existing ...
Liviu Popescu, Golan Yona
BICOB
2009
Springer
16 years 1 months ago
Assembly of Large Genomes from Paired Short Reads
The de novo assembly of genomes from high-throughput short reads is an active area of research. Several promising methods have been recently developed, with applicability mainly re...
Benjamin G. Jackson, Patrick S. Schnable, Srinivas...
SSDBM
2010
IEEE
117views Database» more  SSDBM 2010»
15 years 11 months ago
Finding Top-k Similar Pairs of Objects Annotated with Terms from an Ontology
With the growing focus on semantic searches and interpretations, an increasing number of standardized vocabularies and ontologies are being designed and used to describe data. We ...
Arnab Bhattacharya, Abhishek Bhowmick, Ambuj K. Si...