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RECOMB
2006
Springer
16 years 7 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
CORR
2008
Springer
107views Education» more  CORR 2008»
15 years 6 months ago
The MIMO Iterative Waterfilling Algorithm
Abstract--This paper considers the noncooperative maximization of mutual information in the vector Gaussian interference channel in a fully distributed fashion via game theory. Thi...
Gesualdo Scutari, Daniel Pérez Palomar, Ser...
NJC
2006
125views more  NJC 2006»
15 years 6 months ago
PRO: A Model for the Design and Analysis of Efficient and Scalable Parallel Algorithms
Abstract. We present a new parallel computation model called the Parallel ResourceOptimal computation model. PRO is a framework being proposed to enable the design of efficient and...
Assefaw Hadish Gebremedhin, Mohamed Essaïdi, ...
STOC
2004
ACM
94views Algorithms» more  STOC 2004»
16 years 7 months ago
Sublinear algorithms for testing monotone and unimodal distributions
The complexity of testing properties of monotone and unimodal distributions, when given access only to samples of the distribution, is investigated. Two kinds of sublineartime alg...
Tugkan Batu, Ravi Kumar, Ronitt Rubinfeld
178
Voted
SIGMOD
2008
ACM
140views Database» more  SIGMOD 2008»
15 years 6 months ago
Near-optimal algorithms for shared filter evaluation in data stream systems
We consider the problem of evaluating multiple overlapping queries defined on data streams, where each query is a conjunction of multiple filters and each filter may be shared acr...
Zhen Liu, Srinivasan Parthasarathy 0002, Anand Ran...