Background: High-throughput molecular biology provides new data at an incredible rate, so that the increase in the size of biological databanks is enormous and very rapid. This sc...
We introduce S-DUDE, a new algorithm for denoising Discrete Memoryless Channel (DMC)-corrupted data. The algorithm, which generalizes the recently introduced DUDE (Discrete Univer...
As more and more genomes are sequenced, evolutionary biologists are becoming increasingly interested in evolution at the level of whole genomes, in scenarios in which the genome e...
Krister M. Swenson, Mark Marron, Joel V. Earnest-D...
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
This paper is devoted to the following incremental problem. Initially, a graph and a distinguished subset of vertices, called initial group, are given. This group is connected by ...