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WABI
2007
Springer
102views Bioinformatics» more  WABI 2007»
16 years 28 days ago
Homology Search with Fragmented Nucleic Acid Sequence Patterns
The comprehensive annotation of non-coding RNAs in newly sequenced genomes is still a largely unsolved problem because many functional RNAs exhibit not only poorly conserved sequen...
Axel Mosig, Julian J.-L. Chen, Peter F. Stadler
ISCA
2006
IEEE
125views Hardware» more  ISCA 2006»
16 years 25 days ago
Architectural Semantics for Practical Transactional Memory
Transactional Memory (TM) simplifies parallel programming by allowing for parallel execution of atomic tasks. Thus far, TM systems have focused on implementing transactional stat...
Austen McDonald, JaeWoong Chung, Brian D. Carlstro...
167
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APLAS
2006
ACM
16 years 24 days ago
Scheme with Classes, Mixins, and Traits
Abstract. The Scheme language report advocates language design as the composition of a small set of orthogonal constructs, instead of a large accumulation of features. In this pape...
Matthew Flatt, Robert Bruce Findler, Matthias Fell...
COMPLIFE
2005
Springer
16 years 11 days ago
Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Markus Bauer, Gunnar W. Klau, Knut Reinert
168
Voted
PLDI
2010
ACM
15 years 12 months ago
A GPGPU compiler for memory optimization and parallelism management
This paper presents a novel optimizing compiler for general purpose computation on graphics processing units (GPGPU). It addresses two major challenges of developing high performa...
Yi Yang, Ping Xiang, Jingfei Kong, Huiyang Zhou
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