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JCB
2007
106views more  JCB 2007»
15 years 6 months ago
Clustered Sequence Representation for Fast Homology Search
We present a novel approach to managing redundancy in sequence databanks such as GenBank. We store clusters of near-identical sequences as a representative union-sequence and a se...
Michael Cameron, Yaniv Bernstein, Hugh E. Williams
JCB
2007
94views more  JCB 2007»
15 years 6 months ago
A Quantile Method for Sizing Optical Maps
Optical mapping is an integrated system for the analysis of single DNA molecules. It constructs restriction maps (noted as “optical map”) from individual DNA molecules present...
Haifeng Li, Anton Valouev, David C. Schwartz, Mich...
JCC
2007
110views more  JCC 2007»
15 years 6 months ago
Improved grid-based algorithm for Bader charge allocation
: An improvement to the grid-based algorithm of Henkelman et al. for the calculation of Bader volumes is suggested, which more accurately calculates atomic properties as predicted ...
Edward Sanville, Steven D. Kenny, Roger Smith, Gra...
JCC
2007
115views more  JCC 2007»
15 years 6 months ago
The role of radial nodes of atomic orbitals for chemical bonding and the periodic table
: The role of radial nodes, or of their absence, in valence orbitals for chemical bonding and periodic trends is discussed from a unified viewpoint. In particular, we emphasize th...
Martin Kaupp
JCC
2007
80views more  JCC 2007»
15 years 6 months ago
In between worlds: G.N. Lewis, the shared pair bond and its multifarious contexts
: In this paper, I will look at the rather convoluted discovery process which gave birth to the concept of the shared electron pair bond as developed by G.N. Lewis, to be subsequen...
Ana Simões