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» A universe of binding and computation
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RECOMB
2005
Springer
16 years 7 months ago
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations
Background: Most cellular processes are carried out by multi-protein complexes, groups of proteins that bind together to perform a specific task. Some proteins form stable complex...
Elena Zotenko, Katia S. Guimarães, Raja Jot...
235
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RECOMB
2001
Springer
16 years 7 months ago
Finding motifs using random projections
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
Jeremy Buhler, Martin Tompa
ICFP
2008
ACM
16 years 6 months ago
Implicitly-threaded parallelism in Manticore
The increasing availability of commodity multicore processors is making parallel computing available to the masses. Traditional parallel languages are largely intended for large-s...
Matthew Fluet, Mike Rainey, John H. Reppy, Adam Sh...
DSN
2007
IEEE
16 years 29 days ago
Utilizing Dynamically Coupled Cores to Form a Resilient Chip Multiprocessor
Aggressive CMOS scaling will make future chip multiprocessors (CMPs) increasingly susceptible to transient faults, hard errors, manufacturing defects, and process variations. Exis...
Christopher LaFrieda, Engin Ipek, José F. M...
IMSCCS
2006
IEEE
16 years 19 days ago
Frequency Distribution of TATA Box and Extension Sequences on Human Promoters
Background: TATA box is one of the most important transcription factor binding sites. But the exact sequences of TATA box are still not very clear. Results: In this study, we cond...
Wei Shi, Wanlei Zhou