70 search results - page 5 / 14 » A simple and fast heuristic for protein structure comparison |
174
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CSR
2006
Springer
15 years 9 months ago
2006
Springer
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
171
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BMCBI
2007
15 years 6 months ago
2007
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...
185
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PRIB
2010
Springer
15 years 3 months ago
2010
Springer
Abstract. An important unsolved problem in structural bioinformatics is that of protein structure prediction (PSP), the reconstruction of a biologically plausible three-dimensional...
180
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JCB
2008
15 years 6 months ago
2008
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
149
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VLSM
2005
Springer
15 years 11 months ago
2005
Springer
In this paper we present a simple modification of the Fast Marching algorithm to speed up the computation using a heuristic. This modification leads to an algorithm that is simil...