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BMCBI
2004
208views more  BMCBI 2004»
15 years 6 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
ENTCS
2010
97views more  ENTCS 2010»
15 years 3 months ago
A Framework for Modelling and Simulating Networks of Cells
Several complex biological phenomena are to be modelled in terms of a large and dynamic network of compartments, where the interplay between inter-compartment and intra-compartmen...
Sara Montagna, Mirko Viroli
ML
2002
ACM
128views Machine Learning» more  ML 2002»
15 years 6 months ago
A Simple Method for Generating Additive Clustering Models with Limited Complexity
Additive clustering was originally developed within cognitive psychology to enable the development of featural models of human mental representation. The representational flexibili...
Michael D. Lee
INFOVIS
1999
IEEE
15 years 10 months ago
Visualizing Application Behavior on Superscalar Processors
The advent of superscalar processors with out-of-order execution makes it increasingly difficult to determine how well an application is utilizing the processor and how to adapt t...
Chris Stolte, Robert Bosch, Pat Hanrahan, Mendel R...
MICRO
2010
IEEE
156views Hardware» more  MICRO 2010»
15 years 4 months ago
Explicit Communication and Synchronization in SARC
SARC merges cache controller and network interface functions by relying on a single hardware primitive: each access checks the tag and the state of the addressed line for possible...
Manolis Katevenis, Vassilis Papaefstathiou, Stamat...