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WCRE
2010
IEEE
15 years 4 months ago
Predicting Re-opened Bugs: A Case Study on the Eclipse Project
—Bug fixing accounts for a large amount of the software maintenance resources. Generally, bugs are reported, fixed, verified and closed. However, in some cases bugs have to be...
Emad Shihab, Akinori Ihara, Yasutaka Kamei, Walid ...
ICCAD
2001
IEEE
108views Hardware» more  ICCAD 2001»
16 years 3 months ago
Placement Driven Retiming with a Coupled Edge Timing Model
Retiming is a widely investigated technique for performance optimization. It performs powerful modifications on a circuit netlist. However, often it is not clear, whether the pred...
Ingmar Neumann, Wolfgang Kunz
SAC
2009
ACM
16 years 1 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
CSB
2004
IEEE
131views Bioinformatics» more  CSB 2004»
15 years 10 months ago
Improved Fourier Transform Method for Unsupervised Cell-Cycle Regulated Gene Prediction
Motivation: Cell-cycle regulated gene prediction using microarray time-course measurements of the mRNA expression levels of genes has been used by several researchers. The popular...
Karuturi R. Krishna Murthy, Liu Jian Hua
BMCBI
2010
105views more  BMCBI 2010»
15 years 6 months ago
A knowledge-guided strategy for improving the accuracy of scoring functions in binding affinity prediction
Background: Current scoring functions are not very successful in protein-ligand binding affinity prediction albeit their popularity in structure-based drug designs. Here, we propo...
Tiejun Cheng, Zhihai Liu, Renxiao Wang