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BMCBI
2007
162views more  BMCBI 2007»
15 years 6 months ago
Three-Dimensional Phylogeny Explorer: Distinguishing paralogs, lateral transfer, and violation of "molecular clock" assumption w
Background: Construction and interpretation of phylogenetic trees has been a major research topic for understanding the evolution of genes. Increases in sequence data and complexi...
Namshin Kim, Christopher Lee
ENTCS
2008
137views more  ENTCS 2008»
15 years 6 months ago
Computerizing Mathematical Text with MathLang
Mathematical texts can be computerized in many ways that capture differing amounts of the mathematical meaning. At one end, there is document imaging, which captures the arrangeme...
Fairouz Kamareddine, J. B. Wells
TOMACS
1998
140views more  TOMACS 1998»
15 years 6 months ago
Technical Note: A Hierarchical Computer Architecture Design and Simulation Environment
architectures at multiple levels of abstraction, encompassing both hardware and software. It has five modes of operation (Design, Model Validation, Build Simulation, Simulate Syste...
Paul S. Coe, Fred W. Howell, Roland N. Ibbett, Lau...
ICWSM
2009
15 years 4 months ago
Gephi: An Open Source Software for Exploring and Manipulating Networks
Gephi is an open source software for graph and network analysis. It uses a 3D render engine to display large networks in real-time and to speed up the exploration. A flexible and ...
Mathieu Bastian, Sebastien Heymann, Mathieu Jacomy
BMCBI
2010
195views more  BMCBI 2010»
15 years 1 months ago
MBAT: A scalable informatics system for unifying digital atlasing workflows
Background: Digital atlases provide a common semantic and spatial coordinate system that can be leveraged to compare, contrast, and correlate data from disparate sources. As the q...
Daren Lee, Seth Ruffins, Queenie Ng, Nikhil Sane, ...