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DAC
2009
ACM
16 years 1 months ago
PiCAP: a parallel and incremental capacitance extraction considering stochastic process variation
It is unknown how to include stochastic process variation into fast-multipole-method (FMM) for a full chip capacitance extraction. This paper presents a parallel FMM extraction us...
Fang Gong, Hao Yu, Lei He
IPPS
2009
IEEE
16 years 1 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
ICPPW
2008
IEEE
16 years 1 months ago
Replay-Based Synchronization of Timestamps in Event Traces of Massively Parallel Applications
Event traces are helpful in understanding the performance behavior of message-passing applications since they allow in-depth analyses of communication and synchronization patterns...
Daniel Becker, John C. Linford, Rolf Rabenseifner,...
IPPS
2007
IEEE
16 years 1 months ago
Coarse-grain Parallel Execution for 2-dimensional PDE Problems
This paper presents a new approach for the execution of coarse-grain (tiled) parallel SPMD code for applications derived from the explicit discretization of 2-dimensional PDE prob...
Georgios I. Goumas, Nikolaos Drosinos, Vasileios K...
CIKM
2007
Springer
16 years 1 months ago
Parallel linkage
We study the parallelization of the (record) linkage problem – i.e., to identify matching records between two collections of records, A and B. One of main idiosyncrasies of the ...
Hung-sik Kim, Dongwon Lee