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RECOMB
2007
Springer
16 years 7 months ago
A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements
Abstract. An important problem in biology is to understand correspondences between mRNA microarray levels and mass spectrometry peptide counts. Recently, a compendium of mRNA expre...
Anitha Kannan, Andrew Emili, Brendan J. Frey
BMCBI
2007
145views more  BMCBI 2007»
15 years 6 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
PVLDB
2010
167views more  PVLDB 2010»
15 years 5 months ago
Runtime Measurements in the Cloud: Observing, Analyzing, and Reducing Variance
One of the main reasons why cloud computing has gained so much popularity is due to its ease of use and its ability to scale computing resources on demand. As a result, users can ...
Jörg Schad, Jens Dittrich, Jorge-Arnulfo Quia...
BMCBI
2011
14 years 10 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
DKE
2007
107views more  DKE 2007»
15 years 6 months ago
A clustering method based on path similarities of XML data
Current studies on the storage of XML data are focused on either the efficient mapping of XML data onto an existing RDBMS or the development of a native XML storage. Some native X...
Il-Hwan Choi, Bongki Moon, Hyoung-Joo Kim