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348
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BMCBI
2005
306views more  BMCBI 2005»
15 years 6 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
174
Voted
BMCBI
2005
116views more  BMCBI 2005»
15 years 6 months ago
Can Zipf's law be adapted to normalize microarrays?
Background: Normalization is the process of removing non-biological sources of variation between array experiments. Recent investigations of data in gene expression databases for ...
Timothy Lu, Christine M. Costello, Peter J. P. Cro...
197
Voted
BMCBI
2010
121views more  BMCBI 2010»
15 years 4 months ago
Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
Miriam R. Kantorovitz, Zoi Rapti, Vladimir Gelev, ...
334
Voted
ICDE
2009
IEEE
135views Database» more  ICDE 2009»
16 years 8 months ago
Space-Constrained Gram-Based Indexing for Efficient Approximate String Search
Abstract-- Answering approximate queries on string collections is important in applications such as data cleaning, query relaxation, and spell checking, where inconsistencies and e...
Alexander Behm, Shengyue Ji, Chen Li, Jiaheng Lu
170
Voted
DAC
2005
ACM
16 years 7 months ago
Device and architecture co-optimization for FPGA power reduction
Device optimization considering supply voltage Vdd and threshold voltage Vt tuning does not increase chip area but has a great impact on power and performance in the nanometer tec...
Lerong Cheng, Phoebe Wong, Fei Li, Yan Lin, Lei He
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