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RECOMB
2003
Springer
16 years 6 months ago
Physical network models and multi-source data integration
We develop a new framework for inferring models of transcriptional regulation. The models in this approach, which we call physical models, are constructed on the basis of verifiab...
Chen-Hsiang Yeang, Tommi Jaakkola
RECOMB
2002
Springer
16 years 6 months ago
DNA sequence evolution with neighbor-dependent mutation
We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...
Peter F. Arndt, Christopher B. Burge, Terence Hwa
STOC
2007
ACM
100views Algorithms» more  STOC 2007»
16 years 6 months ago
Reordering buffers for general metric spaces
In the reordering buffer problem, we are given an input sequence of requests for service each of which corresponds to a point in a metric space. The cost of serving the requests h...
Matthias Englert, Harald Räcke, Matthias West...
SIGMOD
2007
ACM
225views Database» more  SIGMOD 2007»
16 years 6 months ago
From complete to incomplete information and back
Incomplete information arises naturally in numerous data management applications. Recently, several researchers have studied query processing in the context of incomplete informat...
Lyublena Antova, Christoph Koch, Dan Olteanu
SIGMOD
2006
ACM
232views Database» more  SIGMOD 2006»
16 years 6 months ago
To search or to crawl?: towards a query optimizer for text-centric tasks
Text is ubiquitous and, not surprisingly, many important applications rely on textual data for a variety of tasks. As a notable example, information extraction applications derive...
Panagiotis G. Ipeirotis, Eugene Agichtein, Pranay ...
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