We develop a new framework for inferring models of transcriptional regulation. The models in this approach, which we call physical models, are constructed on the basis of verifiab...
We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...
In the reordering buffer problem, we are given an input sequence of requests for service each of which corresponds to a point in a metric space. The cost of serving the requests h...
Incomplete information arises naturally in numerous data management applications. Recently, several researchers have studied query processing in the context of incomplete informat...
Text is ubiquitous and, not surprisingly, many important applications rely on textual data for a variety of tasks. As a notable example, information extraction applications derive...
Panagiotis G. Ipeirotis, Eugene Agichtein, Pranay ...